PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G015000.1
Common NamePHAVU_007G015000g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family TCP
Protein Properties Length: 253aa    MW: 26806 Da    PI: 10.5887
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G015000.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP125.65.3e-3928120292
                 TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...k 89 
                         a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s+ a+ns s    +
  Phvul.007G015000.1  28 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-SVSLSVRAANSASLsspS 117
                         78*******************************************************************777.222222222111111111 PP

                 TCP  90 aak 92 
                         +a+
  Phvul.007G015000.1 118 SAS 120
                         111 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.3E-3334126IPR005333Transcription factor, TCP
PROSITE profilePS5136928.2093488IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MSTSDGTTNG VTNASIIDQQ RHQPQPLAVK KPPSKDRHSK VDGRGRRIRM PIICAARVFQ  60
LTRELGHKSD GQTIEWLLRQ AEPSIIAATG TGTTPASFSS VSLSVRAANS ASLSSPSSAS  120
DHKPQLLAPT PFILGKRIRT DDESSKDDAV SVGPSLVGPS TPSGLWALPT RPDFGQIWSF  180
AAAAPEMVVH PPAVSVSQQQ VSLFAHHQRQ QQQAIGEASA ARVGNYLPGH LNLLASLSGG  240
HGNSGRRDDE HR*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00524DAPTransfer from AT5G23280Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007142764.10.0hypothetical protein PHAVU_007G015000g
SwissprotQ9FMX21e-95TCP7_ARATH; Transcription factor TCP7
TrEMBLV7BCY60.0V7BCY6_PHAVU; Uncharacterized protein
STRINGGLYMA10G43190.11e-137(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54693153
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.11e-81TCP family protein